Ensembl Genomes API
Auxillary Perl API for Ensembl Genomes
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Here is a list of all documented class members with links to the class documentation for each member:
- f -
features() :
Bio::EnsEMBL::Utils::MetaData::GenomeInfo
fetch_all() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_dbname() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_division() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_name() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_all_by_name_and_class() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_all_by_name_and_rank() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_all_by_name_pattern() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_rank() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_all_by_sequence_accession() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_sequence_accession_unversioned() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_sequence_accession_versioned() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_taxon_ids() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_all_by_taxonomy_branch() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_taxonomy_id() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_by_taxonomy_ids() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_common_ancestors() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_all_compara_by_division() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_compara_by_method() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_comparas() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_with_compara() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_with_genome_alignments() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_with_other_alignments() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_with_pan_compara() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_with_peptide_compara() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_all_with_variation() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_ancestor_by_rank() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_ancestors() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_by_alias() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_any_name() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_assembly_id() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_assembly_id_unversioned() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_assembly_id_versioned() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_coredbadaptor() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_by_coredbadaptors() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_by_dbID() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_dbIDs() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_name() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_species() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_by_taxon_id() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_by_taxon_name() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_children() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_common_ancestor() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_compara_by_dbID() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_compara_by_dbname_method_set() :
Bio::EnsEMBL::Utils::MetaData::DBSQL::GenomeInfoAdaptor
fetch_descendant_ids() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_descendants() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_descendants_offset() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_leaf_nodes() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_parent() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
fetch_root() :
Bio::EnsEMBL::DBSQL::TaxonomyNodeAdaptor
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